BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A11LP1|AL426308
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1178 1471 0.0
>3x_Contig1178
Length = 7379
Score = 1471 bits (732), Expect = 0.0
Identities = 768/788 (97%), Gaps = 2/788 (0%)
Strand = Plus / Plus
Query: 8 aaaaaaatactgaggagaggagcaatgtcgtgtagcgaaatttaacggcatattgctgac 67
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 2584 aaaaaaatactgaggagaggtgcaatgtcgtgtagcgaaatt-aacggcatattgctgac 2642
Query: 68 acacgttatagccactttctttttttttttttttaccttaaaactcaaaagatcagattc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 acacgttatagccactttctttttttttttttttaccttaaaactcaaaagatcagattc 2702
Query: 128 aatatgattatacatatagatagacaatattctaactgcaaacgttattaattctacaat 187
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 aatattattatacatatagatagacaatattctaactgcaaacgttattaattctacaat 2762
Query: 188 attaatggggaaatccgatacgttaagcattattctcatgcaattaatgatgaattggtt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 attaatggggaaatccgatacgttaagcattattctcatgcaattaatgatgaattggtt 2822
Query: 248 ggktgtgataccgattgatataagtgcttttccttgtcccagaatttgtacaacaaatct 307
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 ggttgtgataccgattgatataagtgcttttccttgtcccagaatttgtacaacaaatct 2882
Query: 308 gcgtacctttgtagctcttccacactgattatsaatctaaaatcacataggrtcaaraac 367
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||
Sbjct: 2883 gcgtacctttgtagctcttccacactgattatcaatctaaaatcacataggatcaaaaac 2942
Query: 368 tggrgttctaaatgattcaattcttgcaacgagataccgccaactctcgcatatcttgra 427
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2943 tggagttctaaatgattcaattcttgcaacgagataccgccaactctcgcatatcttgaa 3002
Query: 428 ttactgtagaaaragtcactgataaacttggtgcttaccgttatcgctgcaatgataagc 487
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3003 ttactgtagaaaaagtcactgataaacttggtgcttaccgttatcgctgcaatgataagc 3062
Query: 488 ctgtgaatgttatgagagtccatcacgaaaagttgtggrgatgactgatgtgctagcgaa 547
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3063 ctgtgaatgttatgagagtccatcacgaaaagttgtggagatgactgatgtgctagcgaa 3122
Query: 548 g-sgtcgtcttatccggkgtagacacgacagakaccatgtrctcttgtgcratggcattg 606
| |||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 3123 gccgtcgtcttatccggtgtagacacgacagataccatgtactcttgtgcaatggcattg 3182
Query: 607 catttttttgctattctatcarratggaccaaaagcgagagtwacacatcgttcgtcgtc 666
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 3183 catttttttgctattctatcaaaatggaccaaaagcgagagtaacacatcgttcgtcgtc 3242
Query: 667 ggacaatacttttgaattctttgaaagtattgtttcaatgttattcctggtacttgttta 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 ggacaatacttttgaattctttgaaagtattgtttcaatgttattcctggtacttgttta 3302
Query: 727 cctctaaaactcagtatttctctcataagaggtatgtttttcccctgagatgtttcgaaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3303 cctctaaaactcagtatttctctcataagaggtatgtttttcccctgagatgtttcgaaa 3362
Query: 787 tttggagt 794
||||||||
Sbjct: 3363 tttggagt 3370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,849
Number of Sequences: 1807
Number of extensions: 15849
Number of successful extensions: 3229
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)